PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sevir.9G428400.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
Family bZIP
Protein Properties Length: 392aa    MW: 44132.7 Da    PI: 8.4732
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sevir.9G428400.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.12.4e-10106148446
                         XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 
                          k+ rr+++NReAAr+sR+RKka++++Le    +L +  ++L+
  Sevir.9G428400.1.p 106 QKVLRRLAQNREAARKSRLRKKAYVQQLESSKLKLASLEQELQ 148
                         5899*************************86666666555554 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.6E-8103166IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.289105149IPR004827Basic-leucine zipper domain
PfamPF001702.4E-7107148IPR004827Basic-leucine zipper domain
CDDcd147084.98E-21107159No hitNo description
SuperFamilySSF579596.13E-7107150No hitNo description
Gene3DG3DSA:1.20.5.1701.0E-7109152No hitNo description
PROSITE patternPS000360110125IPR004827Basic-leucine zipper domain
PfamPF141446.0E-33189264IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 392 aa     Download sequence    Send to blast
MDDLLLCQII LQIFNFIPVQ SAHVILKSVH VTCSIIYDLD FQYKETSFIC VLLHVNFLPY  60
SFMHKHCISV IFLNQLLQLE NGQSGAIVMA SNSSDRSDRS DKPMDQKVLR RLAQNREAAR  120
KSRLRKKAYV QQLESSKLKL ASLEQELQKA RQQGIFISSS GDQTHAMSGN GAMTFDLEYS  180
RWQEEQNKQI NELRTAVNAH ASDSDLRLIV DGIMAHYDEI FRLKGVAAKA DVFHILSGMW  240
KTPAERCFLW LGGFRSSELL KLLVNQLEPL TEQQLMGLSN LQQSSQQAED ALSQGMEALQ  300
QSLAETLAGS LGPSGSSGNV ANYMGQMAMA MGKLGTLENF LRQADNLRQQ TLHQMQRILT  360
IRQAARALLA IHDYFSRLRA LSSLWLARPR E*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0668520.0BT066852.1 Zea mays full-length cDNA clone ZM_BFb0077I20 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004984573.10.0PREDICTED: transcription factor HBP-1b(c38)-like
RefseqXP_004984574.10.0PREDICTED: transcription factor HBP-1b(c38)-like
SwissprotQ415581e-180HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBLK4ACB30.0K4ACB3_SETIT; Uncharacterized protein
STRINGSi036520m0.0(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP48638185
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06950.41e-143bZIP family protein